Confined melanoma transcriptomics/epigenomics Rawbulk RNA-seq, ATAC-seq, and ChIP-seq data from Hunter et al., Nature (2025) can be downloaded from GEO: GSE253803. TurboID proteomics data can be downloaded from ProteomeCentral: PXD060265.
Zebrafish tumor/microenvironment transcriptomics Raw spatial transcriptomics, scRNA-seq, and snRNA-seq data from Hunter, Moncada, et al., Nature Communications (2021) can be downloaded from GEO: GSE159709. The associated code can be found here and some useful functions can be found in my R package here.